Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC101163155Nucleobindin 2a. (495 aa)    
Predicted Functional Partners:
apln
Apelin.
      
 0.687
LOC101167327
FAM20C golgi associated secretory pathway kinase.
    
 0.646
LOC101163577
FAM20C golgi associated secretory pathway kinase a.
    
 0.646
SPX
Spexin hormone.
      
 0.624
LOC101155694
Peptide YYa.
      
 0.560
LOC101155603
Galanin receptor 2a; Belongs to the G-protein coupled receptor 1 family.
      
 0.521
fam20a
FAM20A golgi associated secretory pathway pseudokinase.
     
  0.518
LOC110015368
Family with sequence similarity 20 member C, like.
    
 0.514
LOC101164404
Fam20C domain-containing protein.
    
 0.514
LOC101156145
Melanin-concentrating hormone receptor 1a.
      
 0.497
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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