Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC101174691Annexin. (507 aa)    
Predicted Functional Partners:
th2
BH4_AAA_HYDROXYL_2 domain-containing protein.
      
 0.634
il10
Interleukin 10.
      
 0.581
ppp2cb
Serine/threonine-protein phosphatase.
   
 
 0.544
tfg
Trafficking from ER to golgi regulator.
   
  0.525
LOC101162581
Grancalcin.
   
 
 0.505
tsg101
Tumor susceptibility 101a.
   
 
 0.499
CD9
Tetraspanin.
   
 
 0.495
psma1
Proteasome endopeptidase complex.
   
  
 0.487
cd63
Tetraspanin.
   
  
 0.484
LOC101157587
Uncharacterized protein.
   
 
 0.474
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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