Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
b4galt4UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 4. (347 aa)    
Predicted Functional Partners:
b3gnt5
Hexosyltransferase.
   
 
 0.937
B3GALT1
Hexosyltransferase.
   
 
 0.928
LOC101163306
Hexosyltransferase.
   
 
 0.922
LOC101155918
Hexosyltransferase.
   
 
 0.918
LOC101163432
Hexosyltransferase.
   
 
 0.914
LOC101173646
Hexosyltransferase.
   
 
 0.914
LOC101173163
Hexosyltransferase.
   
 
 0.914
B3GALT2
Hexosyltransferase.
   
 
 0.914
LOC101175309
Hexosyltransferase.
   
 
 0.914
LOC101168731
Hexosyltransferase.
   
 
 0.913
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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