Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ttc9bTetratricopeptide repeat domain 9B. (248 aa)    
Predicted Functional Partners:
LOC101167671
Serine/threonine kinase 10.
      
 0.736
ppil1
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
  
 0.662
pin4
Peptidyl-prolyl cis-trans isomerase.
   
 
 0.645
cnep1r1
CTD nuclear envelope phosphatase 1 regulatory subunit 1.
      
 0.639
rnf7
Ring finger protein 7.
   
  
 0.585
fbxw5
F-box and WD repeat domain containing 5.
   
 
 0.582
trap1
TNF receptor-associated protein 1.
   
 0.574
LOC101169506
Heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 2.
   
 0.574
tsc1
TSC complex subunit 1b.
   
 0.574
ENSORLP00000031311
Uncharacterized protein.
   
 0.574
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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