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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101165632Cytochrome P450, family 24, subfamily A, polypeptide 1; Belongs to the cytochrome P450 family. (513 aa)    
Predicted Functional Partners:
LOC101164878
Cytochrome P450, family 2, subfamily R, polypeptide 1; Belongs to the cytochrome P450 family.
  
0.937
LOC101172325
Cytochrome P450, family 27, subfamily B, polypeptide 1; Belongs to the cytochrome P450 family.
  
 
0.922
fdxr
NADPH:adrenodoxin oxidoreductase, mitochondrial.
     
 0.679
tm7sf2
Transmembrane 7 superfamily member 2.
   
 0.654
chdh
Choline dehydrogenase.
     
 0.635
aasdh
Aminoadipate-semialdehyde dehydrogenase.
  
 0.629
smox
Spermine oxidase.
      
 0.594
fdx2
Ferredoxin 2.
  
 0.586
fdx1
2Fe-2S ferredoxin-type domain-containing protein.
  
 0.586
vdralpha
Uncharacterized protein.
    
 
 0.554
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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