Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
LOC101165632Cytochrome P450, family 24, subfamily A, polypeptide 1; Belongs to the cytochrome P450 family. (513 aa)    
Predicted Functional Partners:
LOC101164878
Cytochrome P450, family 2, subfamily R, polypeptide 1; Belongs to the cytochrome P450 family.
  
 
0.939
LOC101172325
Cytochrome P450, family 27, subfamily B, polypeptide 1; Belongs to the cytochrome P450 family.
  
  
0.921
tm7sf2
Transmembrane 7 superfamily member 2.
    
 0.749
dhcr7
7-dehydrocholesterol reductase.
    
 0.694
fdxr
NADPH:adrenodoxin oxidoreductase, mitochondrial.
     
 0.665
aldh16a1
Aldehyde dehydrogenase 16 family, member A1.
   
 0.655
aldh2
Aldehyde dehydrogenase 2 family member, tandem duplicate 2; Belongs to the aldehyde dehydrogenase family.
   
 0.655
chdh
Choline dehydrogenase.
     
 0.652
vdralpha
Uncharacterized protein.
    
 0.601
ehhadh
Enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase; Belongs to the enoyl-CoA hydratase/isomerase family.
    
 0.587
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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