Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC101165396Solute carrier family 27 member 1a. (648 aa)    
Predicted Functional Partners:
slc27a4
Solute carrier family 27 member 4.
  
 
0.984
LOC101162431
Solute carrier family 27 member 1b.
  
 
0.925
aasdh
Aminoadipate-semialdehyde dehydrogenase.
  
 
 0.819
LOC101160447
RAN binding protein 2.
   
 0.634
LOC101171574
Peroxisomal biogenesis factor 11 alpha.
   
 0.629
pex11b
Peroxisomal biogenesis factor 11 beta.
   
 0.629
phyh
Phytanoyl-CoA 2-hydroxylase.
   
  
 0.620
med14
Mediator of RNA polymerase II transcription subunit 14; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.
   
 0.617
cd36
CD36 molecule (thrombospondin receptor); Belongs to the CD36 family.
     
 0.617
hadha
Hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit alpha b; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.609
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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