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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FCGBPSi:dkey-65b12.6. (2557 aa)    
Predicted Functional Partners:
fau
40S ribosomal protein S30.
   
  0.758
LOC101158601
Chitinase, acidic.1; Belongs to the glycosyl hydrolase 18 family.
   
  
 0.524
LOC101158848
Chitinase, acidic.1; Belongs to the glycosyl hydrolase 18 family.
   
  
 0.518
LOC101163739
Chitin-binding type-2 domain-containing protein; Belongs to the glycosyl hydrolase 18 family.
   
  
 0.518
LOC101160447
RAN binding protein 2.
   
 
  0.510
gle1
Uncharacterized protein.
    
 0.475
LOC101159095
Chitinase, acidic.3; Belongs to the glycosyl hydrolase 18 family.
   
  
 0.474
rps28
Ribosomal protein S28.
   
   0.438
rps19
Ribosomal protein S19.
   
 
 0.438
rps24
40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.
   
 
 0.437
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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