Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ewsr1EWS RNA-binding protein 1b. (599 aa)    
Predicted Functional Partners:
H2M705_ORYLA
TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor.
   
 
 0.956
dhx9
DEAH (Asp-Glu-Ala-His) box helicase 9.
   
 0.913
hnrnpm
Heterogeneous nuclear ribonucleoprotein M.
   
 0.904
LOC101167445
TAR DNA binding protein.
   
 0.879
tardbp
TAR DNA binding protein, like.
   
 0.879
HNRNPUL1
Heterogeneous nuclear ribonucleoprotein U like 1.
   
 0.861
hnrnpu
Heterogeneous nuclear ribonucleoprotein Ub.
   
 0.861
ilf3
Interleukin enhancer binding factor 3b.
   
 
 0.842
LOC101168347
CD99 molecule.
      
 0.820
hnrnpk
Heterogeneous nuclear ribonucleoprotein K.
   
 0.812
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
Server load: low (14%) [HD]