STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sipa1l3Signal-induced proliferation-associated 1 like 3. (1755 aa)    
Predicted Functional Partners:
adamts18
ADAM metallopeptidase with thrombospondin type 1 motif, 18.
   
  
 0.508
LOC101167529
RAP1A, member of RAS oncogene family b.
    
 0.507
LOC101172864
Uncharacterized protein.
    
 0.507
LOC101171247
RAP1A, member of RAS oncogene family a.
    
 0.507
cdkn1b
Cyclin-dependent kinase inhibitor 1Bb.
      
 0.504
EFNA5
Ephrin A5; Belongs to the ephrin family.
      
 0.502
RAP2B
RAP2B, member of RAS oncogene family.
    
 0.477
rap2c
RAP2C, member of RAS oncogene family.
    
 0.477
RAP2A
Uncharacterized protein.
    
 0.477
LOC101171042
DIRAS family, GTP-binding RAS-like 1b.
    
 0.464
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.