STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101165945Uncharacterized protein. (670 aa)    
Predicted Functional Partners:
alox5
Arachidonate 5-lipoxygenase a.
  
  
 
0.927
LOC101174953
Arachidonate 12-lipoxygenase.
  
  
 
0.927
H2MRY0_ORYLA
Uncharacterized protein.
  
  
 
0.926
GPX4
Glutathione peroxidase; Belongs to the glutathione peroxidase family.
    
 0.909
LOC101160642
Uncharacterized protein.
    
 0.909
LOC105353996
Uncharacterized protein; Belongs to the cytochrome P450 family.
   
 0.905
cyp2p3
Cytochrome P450 2P3; Belongs to the cytochrome P450 family.
   
 0.905
LOC101167098
Cytochrome P450, family 2, subfamily U, polypeptide 1; Belongs to the cytochrome P450 family.
   
 0.903
alox5ap
Arachidonate 5-lipoxygenase-activating protein.
   
 0.863
cotl1
Coactosin-like F-actin binding protein 1.
    
 
 0.815
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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