STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101164878Cytochrome P450, family 2, subfamily R, polypeptide 1; Belongs to the cytochrome P450 family. (512 aa)    
Predicted Functional Partners:
LOC101172325
Cytochrome P450, family 27, subfamily B, polypeptide 1; Belongs to the cytochrome P450 family.
  
 
0.968
LOC101165632
Cytochrome P450, family 24, subfamily A, polypeptide 1; Belongs to the cytochrome P450 family.
  
 
0.939
dhcr7
7-dehydrocholesterol reductase.
   
 0.811
LOC101156528
Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family.
     
 0.726
cyp3a
Uncharacterized protein.
  
0.716
cyp3a40
Cytochrome P450 3A40.
  
0.716
vdralpha
Uncharacterized protein.
   
 0.648
LOC101156051
Cytochrome P450, family 27, subfamily A, polypeptide 7; Belongs to the cytochrome P450 family.
  
 
 
0.636
LOC101160538
Si:ch211-113j14.1; Belongs to the cytochrome P450 family.
  
 
 
0.634
LOC101175691
Si:dkey-91i10.3; Belongs to the cytochrome P450 family.
  
 
 
0.633
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.