Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
qpctlGlutaminyl-peptide cyclotransferase-like a. (396 aa)    
Predicted Functional Partners:
nudt22
Nudix (nucleoside diphosphate linked moiety X)-type motif 22.
      
 0.694
tmed6
Transmembrane p24 trafficking protein 6.
      
 0.691
nif3l1
NIF3 NGG1 interacting factor 3-like 1 (S. cerevisiae).
    
   0.640
ostm1
Osteoclastogenesis associated transmembrane protein 1.
   
  
 0.626
LOC101157728
ShKT domain-containing protein; Belongs to the CRISP family.
   
 
 0.540
ENSORLP00000026041
Crisp domain-containing protein.
   
 
 0.540
erp44
Endoplasmic reticulum protein 44.
   
 0.535
bckdk
Protein-serine/threonine kinase.
      
 0.532
acaa1
Acetyl-CoA acyltransferase 1; Belongs to the thiolase-like superfamily. Thiolase family.
     
 0.525
trabd
TraB domain containing.
      
 0.516
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
Server load: low (8%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.