Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
tbcbTubulin folding cofactor B. (246 aa)    
Predicted Functional Partners:
tbcd
Tubulin folding cofactor D.
    
 0.962
tbce
Tubulin folding cofactor E.
    
 0.953
arl2
ADP-ribosylation factor-like 2; Belongs to the small GTPase superfamily. Arf family.
   
 
 0.942
GAN
Gigaxonin.
    
 
 0.907
ppp1r14b
Protein phosphatase 1, regulatory (inhibitor) subunit 14Bb.
    
   0.894
H2LGJ7_ORYLA
Si:ch211-131k2.3.
   
 
 0.855
Tbcc
Tubulin folding cofactor C.
      
 0.747
tbca
Tubulin-specific chaperone A; Belongs to the TBCA family.
   
 
 0.726
cct4
T-complex protein 1 subunit delta.
    
 
 0.721
rp2
Protein XRP2; Acts as a GTPase-activating protein (GAP) for tubulin in concert with tubulin-specific chaperone C, but does not enhance tubulin heterodimerization.
      
 0.715
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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