STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pik3ip1Phosphoinositide-3-kinase interacting protein 1. (300 aa)    
Predicted Functional Partners:
themis2
Thymocyte selection associated family member 2.
      
 0.740
Glrx3
Glutaredoxin 3.
      
 0.717
TMEM43
Uncharacterized protein.
      
 0.686
bahd1
Bromo adjacent homology domain containing 1.
      
 0.663
tcim
Transcriptional and immune response regulator a.
      
 0.654
taf3
TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated facto.
      
 0.601
cryba4
Crystallin, beta A4; Belongs to the beta/gamma-crystallin family.
      
 0.594
fbxl5
F-box and leucine-rich repeat protein 5.
      
 0.569
ripk1
Receptor (TNFRSF)-interacting serine-threonine kinase 1, like.
      
 0.564
opn3
G_PROTEIN_RECEP_F1_2 domain-containing protein.
      
 0.562
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.