STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pik3ip1Phosphoinositide-3-kinase interacting protein 1. (300 aa)    
Predicted Functional Partners:
bahd1
Bromo adjacent homology domain containing 1.
      
 0.620
themis2
Thymocyte selection associated family member 2.
      
 0.620
Glrx3
Glutaredoxin 3.
      
 0.607
TMEM43
Uncharacterized protein.
      
 0.603
tcim
Transcriptional and immune response regulator a.
      
 0.588
fbxl5
F-box and leucine-rich repeat protein 5.
      
 0.587
ripk1
Receptor (TNFRSF)-interacting serine-threonine kinase 1, like.
      
 0.580
cryba4
Crystallin, beta A4; Belongs to the beta/gamma-crystallin family.
      
 0.560
LOC101161905
Leucine rich repeat containing 14B.
      
 0.558
popdc2
Popeye domain containing 2.
      
 0.524
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.