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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101155791Uncharacterized protein. (228 aa)    
Predicted Functional Partners:
Tsc2
DUF3384 domain-containing protein.
     
 0.962
LOC101162204
TBC1 domain family, member 7.
     
 0.913
ENSORLP00000031311
Uncharacterized protein.
   
 
 0.913
ddit4
DNA-damage-inducible transcript 4.
  
  
 
0.904
TSC2
TSC complex subunit 2.
     
 0.637
LOC101164105
cAMP responsive element binding protein 1b.
      
 0.511
LOC111947820
Uncharacterized protein.
      
 0.448
LOC101158674
cAMP responsive element binding protein 1.
      
 0.444
guca1b
Uncharacterized protein.
      
 0.443
LOC101158587
Uncharacterized protein.
      
 0.443
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.