STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
adhfe1Alcohol dehydrogenase iron containing 1. (466 aa)    
Predicted Functional Partners:
LOC101163415
Myocardin related transcription factor Aa.
  
 0.993
sord
Sorbitol dehydrogenase.
  
 
 0.952
hsdl2
Hydroxysteroid dehydrogenase like 2.
  
 0.937
cmbl
Carboxymethylenebutenolidase homolog (Pseudomonas).
  
 
 0.930
LOC101172875
Uncharacterized protein.
  
 0.925
adh5-2
PKS_ER domain-containing protein.
  
 0.925
LOC101172385
PKS_ER domain-containing protein.
  
 0.925
adh5
S-(hydroxymethyl)glutathione dehydrogenase; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.
  
 0.924
ilvbl
IlvB (bacterial acetolactate synthase)-like; Belongs to the TPP enzyme family.
    
 0.922
hacl1
2-hydroxyacyl-CoA lyase 1; Belongs to the TPP enzyme family.
    
 0.922
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.