STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101162858Uncharacterized protein. (548 aa)    
Predicted Functional Partners:
slc39a7
Solute carrier family 39 member 7.
  
 0.531
LOC100049397
Metallothionein; Metallothioneins have a high content of cysteine residues that bind various heavy metals; Belongs to the metallothionein superfamily. Type 1 family.
      
 0.487
slc30a9
Solute carrier family 30 member 9.
  
 
 0.459
LOC101163600
Uncharacterized protein.
   
 
 0.438
slc30a6
Solute carrier family 30 member 6.
    
 
 0.431
LOC101171807
ATPase copper transporting beta.
  
  
 0.426
LOC101173428
Uncharacterized protein.
  
  
 0.426
LOC101164902
ATPase copper transporting alpha.
  
  
 0.426
slc39a8
Solute carrier family 39 member 8.
  
 0.426
SLC39A3
Solute carrier family 39 member 3.
   
 
 0.411
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.