STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101157526Lens intrinsic membrane protein 2.2. (174 aa)    
Predicted Functional Partners:
LOC101172536
Crystallin, gamma MX, like 2; Belongs to the beta/gamma-crystallin family.
   
  
 0.588
LOC101172286
Crystallin, gamma MX; Belongs to the beta/gamma-crystallin family.
   
  
 0.536
LOC101161605
Uncharacterized protein; Belongs to the beta/gamma-crystallin family.
  
  
 0.466
lgsn
Lengsin, lens protein with glutamine synthetase domain; Belongs to the glutamine synthetase family.
   
  
 0.416
LOC101160002
Crystallin, beta A1, like 2; Belongs to the beta/gamma-crystallin family.
   
  
 0.410
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.