Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LOC105356765RIC3 acetylcholine receptor chaperone. (363 aa)    
Predicted Functional Partners:
stk33
Serine/threonine kinase 33; Belongs to the protein kinase superfamily.
    
 0.747
chchd2
Coiled-coil-helix-coiled-coil-helix domain containing 2.
      
 0.626
atxn2
Ataxin 2.
      
 0.626
fbxo7
F-box protein 7.
    
 
 0.622
INSC
INSC spindle orientation adaptor protein.
      
 0.607
unc50
Unc-50 homolog (C. elegans).
      
 0.605
copb1
Coatomer subunit beta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.
      
 0.555
psma1
Proteasome endopeptidase complex.
     
 0.544
DNAJC13
DnaJ heat shock protein family (Hsp40) member C13.
      
 0.534
rras2
RAS related 2.
    
 
 0.527
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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