Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC101155366Zinc finger and BTB domain containing 22b. (735 aa)    
Predicted Functional Partners:
tapbp
Uncharacterized protein.
  
 0.602
LOC101158365
Si:ch211-114c17.1.
      
 0.559
LOC101167464
Death-domain associated protein.
  
 
 0.532
slc38a8
Solute carrier family 38 member 8a.
    
 0.522
psmd3
Proteasome 26S subunit, non-ATPase 3.
    
  0.517
dhx35
DEAH-box helicase 35.
   
 0.496
MAFG
MAF bZIP transcription factor G.
    
 0.494
LOC101173788
V-maf avian musculoaponeurotic fibrosarcoma oncogene homolog Ga.
    
 0.494
LOC100049397
Metallothionein; Metallothioneins have a high content of cysteine residues that bind various heavy metals; Belongs to the metallothionein superfamily. Type 1 family.
    
 
 0.490
kifc1
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 
 0.466
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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