STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
wscd2WSC domain containing 2. (562 aa)    
Predicted Functional Partners:
fancm
Uncharacterized protein.
   
 0.997
cenpx
Uncharacterized protein.
    
 0.866
cenpw
Uncharacterized protein.
   
 0.859
cenpq
Uncharacterized protein.
   
 0.751
cenpk
Centromere protein K.
   
 0.737
cenpm
Proliferation associated nuclear element.
   
 0.736
cenpn
Centromere protein N.
   
 0.731
LOC101167609
Solute carrier family 25 member 42; Belongs to the mitochondrial carrier (TC 2.A.29) family.
   
 0.730
SLC25A42
Solute carrier family 25 member 42; Belongs to the mitochondrial carrier (TC 2.A.29) family.
   
 0.730
dut
Deoxyuridine triphosphatase.
   
 0.730
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.