STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101167098Cytochrome P450, family 2, subfamily U, polypeptide 1; Belongs to the cytochrome P450 family. (564 aa)    
Predicted Functional Partners:
LOC101170499
Cytochrome P450, family 4, subfamily F, polypeptide 3; Belongs to the cytochrome P450 family.
  
0.946
cyp2p3
Cytochrome P450 2P3; Belongs to the cytochrome P450 family.
  
 
0.921
LOC105355175
Phospholipase A2 group III.
    
 0.912
proca1
Protein interacting with cyclin A1.
    
 0.912
LOC101165945
Uncharacterized protein.
   
 0.904
pla2g4a
Phospholipase A2.
    
 0.904
LOC101162978
Uncharacterized protein.
   
 0.904
LOC101174158
Uncharacterized protein.
   
 0.904
LOC101173634
Prostaglandin-endoperoxide synthase 1.
   
 
 0.903
LOC101157546
LRAT domain-containing protein.
    
 0.903
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.