Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
cmklr1Chemokine-like receptor 1; Belongs to the G-protein coupled receptor 1 family. (349 aa)    
Predicted Functional Partners:
anxa1
Annexin.
    
 0.652
LOC101167451
Annexin.
    
 0.652
anxa2
Annexin.
    
 0.652
LOC101157835
Uncharacterized protein.
      
 0.623
LOC101160146
Si:dkey-237h12.3.
      
 0.623
hebp1
Uncharacterized protein.
     
 0.534
derl1
Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family.
      
 0.500
LOC101167043
Interleukin 12 receptor, beta 2a, like.
      
 0.498
ENSORLP00000044683
Uncharacterized protein.
      
 0.462
tenm1
Teneurin transmembrane protein 1.
      
 0.427
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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