Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AIF1Allograft inflammatory factor 1. (154 aa)    
Predicted Functional Partners:
tyrobp
Uncharacterized protein.
   
  
 0.953
LOC101169209
Uncharacterized protein.
   
  
 0.765
ENSORLP00000038018
Uncharacterized protein.
   
  
 0.759
ENSORLP00000040537
Fc fragment of IgE, high affinity I, receptor for; gamma polypeptide.
   
  
 0.759
rbfox3
RNA binding fox-1 homolog 3b.
    
 
 0.752
LOC101170982
Uncharacterized protein.
   
 
 0.747
rpsa
40S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. Also functions as a cell surface receptor for laminin. Plays a role in cell adhesion to the basement membrane and in the consequent activation of signaling transduction pathways. May play a role in cell fate determination and tissue morphogenesis. Belongs to the universal ribosomal protein uS2 family.
   
  
 0.728
H2MFT6_ORYLA
Uncharacterized protein.
    
 
 0.726
LOC101157838
C1q domain-containing protein.
   
 
 0.712
H2LWC6_ORYLA
Uncharacterized protein.
   
  
 0.696
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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