Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
mtmr6Myotubularin related protein 6. (654 aa)    
Predicted Functional Partners:
pikfyve
Phosphoinositide kinase, FYVE finger containing.
     
 0.928
FIG4
FIG4 phosphoinositide 5-phosphatase.
     
 0.923
cdipt
CDP-diacylglycerol--inositol 3-phosphatidyltransferase.
     
 0.904
H2MWC6_ORYLA
Si:dkey-266f7.9.
     
  0.900
LOC101162799
Zgc:154055.
   
 0.861
mtmr9
Myotubularin related protein 9.
   
 0.861
inpp5f
Inositol polyphosphate-5-phosphatase F.
     
 0.760
plcd3
Phosphoinositide phospholipase C.
     
 0.759
pik3c3
Phosphatidylinositol 3-kinase catalytic subunit type 3.
    
 0.747
PLCB4
1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase; The production of the second messenger molecules diacylglycerol (DAG) and inositol 1,4,5-trisphosphate (IP3) is mediated by activated phosphatidylinositol-specific phospholipase C enzymes.
     
 0.732
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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