STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amer2APC membrane recruitment protein 2. (574 aa)    
Predicted Functional Partners:
LOC101164239
Ras association domain family member 6.
    
 
 0.696
LOC101159618
Leucine-rich repeats and calponin homology (CH) domain containing 4.
    
 0.609
LOC101161430
Protein-tyrosine sulfotransferase; Catalyzes the O-sulfation of tyrosine residues within acidic motifs of polypeptides, using 3'-phosphoadenylyl sulfate (PAPS) as cosubstrate; Belongs to the protein sulfotransferase family.
    
 0.558
LOC101158689
Methyl-CpG binding domain protein 1b.
  
  0.540
zgpat
Zinc finger, CCCH-type with G patch domain.
      
 0.498
LOC101172374
Si:ch211-214j24.10.
  
     0.484
adam23
ADAM metallopeptidase domain 23.
     
 0.478
ENSORLP00000035938
Uncharacterized protein.
  
  
  0.467
LOC101156109
Protein-tyrosine sulfotransferase; Catalyzes the O-sulfation of tyrosine residues within acidic motifs of polypeptides, using 3'-phosphoadenylyl sulfate (PAPS) as cosubstrate; Belongs to the protein sulfotransferase family.
    
 0.435
LOC101164758
Fibrosin.
  
 
 0.435
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
Server load: low (20%) [HD]