STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amer2APC membrane recruitment protein 2. (574 aa)    
Predicted Functional Partners:
LOC101164239
Ras association domain family member 6.
    
 
 0.566
LOC101158689
Methyl-CpG binding domain protein 1b.
  
  0.560
LOC101159618
Leucine-rich repeats and calponin homology (CH) domain containing 4.
    
 0.523
LOC101172374
Si:ch211-214j24.10.
  
     0.484
ENSORLP00000032656
Uncharacterized protein.
   
 0.472
ENSORLP00000035938
Uncharacterized protein.
  
  
  0.466
LOC100049233
Androgen receptor beta subtype.
  
 
  0.431
LOC101164758
Fibrosin.
  
 
   0.424
casc4
Cancer susceptibility candidate 4.
  
 
  0.422
cfap52
Cilia and flagella associated protein 52.
   
 0.408
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.