STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101156080Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family. (267 aa)    
Predicted Functional Partners:
LOC101174676
Carboxylic ester hydrolase; Belongs to the type-B carboxylesterase/lipase family.
   
 0.640
LOC101175393
Macrophage stimulating 1 receptor a.
    
 0.588
met
MET proto-oncogene, receptor tyrosine kinase.
    
 0.588
mst1r
Macrophage stimulating 1 receptor b.
    
 0.588
LOC101172916
Carboxylic ester hydrolase; Belongs to the type-B carboxylesterase/lipase family.
   
 0.559
etnppl
Ethanolamine-phosphate phospho-lyase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
   
  
 0.557
CEL
Carboxylic ester hydrolase; Belongs to the type-B carboxylesterase/lipase family.
   
 0.541
mapk4
Mitogen-activated protein kinase 4.
    
 
 0.516
pla2g1b
Phospholipase A(2).
   
  
 0.510
LOC101174648
Mitogen-activated protein kinase kinase kinase kinase 4.
      
 0.508
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.