STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
arhgap35Uncharacterized protein. (1560 aa)    
Predicted Functional Partners:
LOC101155194
Uncharacterized protein.
    
 0.965
LOC101173444
Uncharacterized protein.
    
 0.965
LOC101158607
Uncharacterized protein.
    
 0.965
LOC101167618
Uncharacterized protein.
    
 0.965
SRC
Tyrosine-protein kinase.
    
  0.928
LOC101164480
Tyrosine-protein kinase.
    
  0.928
LOC101169478
Rho GTPase activating protein 35b.
  
  
 
0.901
arhgap5
Rho GTPase activating protein 5.
  
  
 
0.901
rasa1
RAS p21 protein activator (GTPase activating protein) 1a.
    
 0.889
LOC101159498
6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4a.
      
 0.813
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.