STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
c4bUncharacterized protein. (1716 aa)    
Predicted Functional Partners:
H2MAB2_ORYLA
Complement component 1, r subcomponent; Belongs to the peptidase S1 family.
   
 0.725
cfi
Complement factor I; Belongs to the peptidase S1 family.
   
 0.681
LOC105354097
Uncharacterized protein.
   
 0.630
C1QL2
Complement C1q like 2.
     
 0.597
c8b
Complement component 8, beta polypeptide.
   
 0.596
LOC101167637
Si:ch1073-280e3.1; Belongs to the peptidase S1 family.
   
 0.535
bf/c2
Bf/C2 protein; Belongs to the peptidase S1 family.
   
 0.530
ENSORLP00000036617
Uncharacterized protein; Belongs to the peptidase S1 family.
   
 0.530
rnf2
Ring finger protein 2.
    
 0.509
RING1
Ring finger protein 1.
    
 0.509
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.