Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
c4bUncharacterized protein. (1716 aa)    
Predicted Functional Partners:
cfi
Complement factor I; Belongs to the peptidase S1 family.
   
 0.757
c6
Complement component 6.
   
 0.700
bf/c2
Bf/C2 protein; Belongs to the peptidase S1 family.
   
 0.657
LOC101169056
G_PROTEIN_RECEP_F1_2 domain-containing protein.
    
 0.654
H2MAB2_ORYLA
Complement component 1, r subcomponent; Belongs to the peptidase S1 family.
   
 0.642
cfp
Uncharacterized protein.
   
 
 0.636
c5
Uncharacterized protein.
   
0.627
LOC105354097
Uncharacterized protein.
    
 0.618
C1QL2
Complement C1q like 2.
     
 0.607
LOC101167637
Si:ch1073-280e3.1; Belongs to the peptidase S1 family.
   
 0.591
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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