STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tmem9bTMEM9 domain family, member B. (188 aa)    
Predicted Functional Partners:
wwc3
WWC family member 3.
    
 
 0.668
clcn3
Chloride channel protein.
    
 
 0.668
clcn5
Chloride channel protein.
    
 
 0.668
tmem53
Transmembrane protein 53.
      
 0.623
dtd2
D-aminoacyl-tRNA deacylase 2.
      
 0.585
tmem214
Transmembrane protein 214.
      
 0.563
rbm42
Uncharacterized protein.
      
 0.552
tm9sf2
Transmembrane 9 superfamily member; Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family.
      
 0.551
LOC101172731
Uncharacterized protein.
      
 0.536
kiaa1324
Si:ch211-163l21.8.
    
 
 0.535
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
Server load: low (22%) [HD]