Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-expression
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[Homology]
Score
H2LRN0_ORYLATubulin domain-containing protein. (109 aa)    
Predicted Functional Partners:
ENSORLP00000043694
Tubulin domain-containing protein; Belongs to the tubulin family.
  
 0.760
LOC101170553
NME/NM23 family member 8; Belongs to the NDK family.
   
 0.759
mad2l1
HORMA domain-containing protein.
   
 0.674
cct2
Uncharacterized protein.
   
 0.671
cct8
Chaperonin containing TCP1, subunit 8 (theta).
   
 0.658
Wdr90
WD_REPEATS_REGION domain-containing protein.
   
 0.650
ENSORLP00000042816
Uncharacterized protein.
   
 0.650
tbca
Tubulin-specific chaperone A; Belongs to the TBCA family.
   
 0.636
cct7
T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.
   
 0.625
eef1g
Eukaryotic translation elongation factor 1 gamma.
   
 
 0.624
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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