STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101155674Alkaline phosphatase, intestinal, tandem duplicate 2; Belongs to the alkaline phosphatase family. (516 aa)    
Predicted Functional Partners:
ntpcr
Nucleoside-triphosphatase, cancer-related.
     
  0.900
pts
6-pyruvoyltetrahydropterin synthase.
     
  0.900
LOC101161367
GTP cyclohydrolase 2.
   
 
  0.900
tpk1
Thiamine pyrophosphokinase; Belongs to the thiamine pyrophosphokinase family.
     
  0.900
Psat1
Phosphoserine aminotransferase 1.
     
 0.619
trip11
Thyroid hormone receptor interactor 11.
   
 0.553
LOC101157325
Alanine--glyoxylate and serine--pyruvate aminotransferase b.
     
 0.504
LOC101174079
Alanine--glyoxylate and serine--pyruvate aminotransferase a.
     
 0.504
nudt12
Nudix (nucleoside diphosphate linked moiety X)-type motif 12.
   
 0.501
LOC101167825
NAD kinase b.
   
 
  0.480
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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