Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
LOC101167122SAM domain-containing protein. (413 aa)    
Predicted Functional Partners:
trrap
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
   
 0.817
meaf6
MYST/Esa1-associated factor 6.
   
 0.796
ruvbl1
RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding.
   
 0.790
dmap1
DNA methyltransferase 1 associated protein 1.
   
 0.755
prmt2
Protein arginine methyltransferase 2; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family.
    
 0.716
mcrs1
Microspherule protein 1.
   
 0.696
kansl2
KAT8 regulatory NSL complex subunit 2.
    
 0.690
actl6a
Actin-like 6A; Belongs to the actin family.
   
 0.682
H2LEK4_ORYLA
L3MBTL histone methyl-lysine binding protein 1a.
   
   0.667
l3mbtl3
L3MBTL histone methyl-lysine binding protein 1b.
   
   0.667
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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