Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
pignPhosphatidylinositol glycan anchor biosynthesis, class N. (933 aa)    
Predicted Functional Partners:
pigv
GPI mannosyltransferase 2; Mannosyltransferase involved in glycosylphosphatidylinositol- anchor biosynthesis.
   
 0.989
pigb
Mannosyltransferase.
     
 0.984
piga
Phosphatidylinositol glycan anchor biosynthesis, class A.
      
 0.897
pigh
Phosphatidylinositol glycan anchor biosynthesis, class H.
      
 0.876
pigl
Phosphatidylinositol glycan anchor biosynthesis, class L.
      
 0.864
pigt
Phosphatidylinositol glycan anchor biosynthesis, class T.
      
 0.841
pigg
Phosphatidylinositol glycan anchor biosynthesis class G.
   
  
0.838
pigk
GPI-anchor transamidase; Mediates GPI anchoring in the endoplasmic reticulum, by replacing a protein's C-terminal GPI attachment signal peptide with a pre-assembled GPI. During this transamidation reaction, the GPI transamidase forms a carbonyl intermediate with the substrate protein. Belongs to the peptidase C13 family.
    
 
 0.827
pigf
Phosphatidylinositol glycan anchor biosynthesis, class F.
    
 0.791
lemd3
LEM domain containing 3.
      
 0.766
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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