LOC100125506 protein (Oryzias latipes) - STRING interaction network

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Score

LOC100125506

Retinoid x receptor, beta b. (444 aa)

Predicted Functional Partners:

pparg

0.979

nr1h3

0.922

rxra

0.908

nr1h4

0.866

med1

0.845

ppard

0.828

ncor1

0.823

ncor2

0.823

PPARA

0.781

ncoa6

0.777

Your Current Organism:

Oryzias latipes

NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC100125506	PPARA	ENSORLP00000008821	ENSORLP00000029840	Retinoid x receptor, beta b.	Peroxisome proliferator-activated receptor alpha b.	0.781
LOC100125506	med1	ENSORLP00000008821	ENSORLP00000043584	Retinoid x receptor, beta b.	Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.	0.845
LOC100125506	ncoa6	ENSORLP00000008821	ENSORLP00000032744	Retinoid x receptor, beta b.	Nuclear receptor coactivator 6.	0.777
LOC100125506	ncor1	ENSORLP00000008821	ENSORLP00000015017	Retinoid x receptor, beta b.	Nuclear receptor corepressor 1.	0.823
LOC100125506	ncor2	ENSORLP00000008821	ENSORLP00000017559	Retinoid x receptor, beta b.	Nuclear receptor corepressor 2.	0.823
LOC100125506	nr1h3	ENSORLP00000008821	ENSORLP00000001581	Retinoid x receptor, beta b.	Nuclear receptor subfamily 1, group H, member 3.	0.922
LOC100125506	nr1h4	ENSORLP00000008821	ENSORLP00000014126	Retinoid x receptor, beta b.	Nuclear receptor subfamily 1, group H, member 4.	0.866
LOC100125506	ppard	ENSORLP00000008821	ENSORLP00000030038	Retinoid x receptor, beta b.	Uncharacterized protein.	0.828
LOC100125506	pparg	ENSORLP00000008821	ENSORLP00000036834	Retinoid x receptor, beta b.	Uncharacterized protein.	0.979
LOC100125506	rxra	ENSORLP00000008821	ENSORLP00000036590	Retinoid x receptor, beta b.	Retinoid X receptor, alpha a.	0.908
PPARA	LOC100125506	ENSORLP00000029840	ENSORLP00000008821	Peroxisome proliferator-activated receptor alpha b.	Retinoid x receptor, beta b.	0.781
PPARA	med1	ENSORLP00000029840	ENSORLP00000043584	Peroxisome proliferator-activated receptor alpha b.	Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.	0.922
PPARA	ncoa6	ENSORLP00000029840	ENSORLP00000032744	Peroxisome proliferator-activated receptor alpha b.	Nuclear receptor coactivator 6.	0.783
PPARA	ncor1	ENSORLP00000029840	ENSORLP00000015017	Peroxisome proliferator-activated receptor alpha b.	Nuclear receptor corepressor 1.	0.868
PPARA	ncor2	ENSORLP00000029840	ENSORLP00000017559	Peroxisome proliferator-activated receptor alpha b.	Nuclear receptor corepressor 2.	0.868
PPARA	nr1h3	ENSORLP00000029840	ENSORLP00000001581	Peroxisome proliferator-activated receptor alpha b.	Nuclear receptor subfamily 1, group H, member 3.	0.806
PPARA	nr1h4	ENSORLP00000029840	ENSORLP00000014126	Peroxisome proliferator-activated receptor alpha b.	Nuclear receptor subfamily 1, group H, member 4.	0.538
PPARA	pparg	ENSORLP00000029840	ENSORLP00000036834	Peroxisome proliferator-activated receptor alpha b.	Uncharacterized protein.	0.517
PPARA	rxra	ENSORLP00000029840	ENSORLP00000036590	Peroxisome proliferator-activated receptor alpha b.	Retinoid X receptor, alpha a.	0.781
med1	LOC100125506	ENSORLP00000043584	ENSORLP00000008821	Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.	Retinoid x receptor, beta b.	0.845