Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC101158040Cdkn1a interacting zinc finger protein 1a. (745 aa)    
Predicted Functional Partners:
LOC101174968
Enhancer of rudimentary homolog; May have a role in the cell cycle.
    
 
 0.840
LOC101161113
Enhancer of rudimentary homolog; May have a role in the cell cycle.
    
 
 0.840
atf6
BZIP domain-containing protein.
      
 0.739
ENSORLP00000033347
CCAAT enhancer binding protein delta.
   
 0.701
ENSORLP00000029827
Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 0.697
snai2
Snail family zinc finger 2.
      
 0.656
ENSORLP00000031025
Proline-rich transmembrane protein 2.
    
 0.620
gpsm2
Uncharacterized protein.
    
 
 0.619
LOC101166386
Fructosamine 3 kinase related protein; Belongs to the fructosamine kinase family.
   
  
 0.615
nutf2
Nuclear transport factor 2.
    
 
 0.601
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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