STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101158040Cdkn1a interacting zinc finger protein 1a. (745 aa)    
Predicted Functional Partners:
LOC101166386
Fructosamine 3 kinase related protein; Belongs to the fructosamine kinase family.
   
  
 0.561
atf6
BZIP domain-containing protein.
   
  
 0.491
ENSORLP00000033347
CCAAT enhancer binding protein delta.
    
 0.486
snai2
Snail family zinc finger 2.
      
 0.485
ENSORLP00000029827
Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 0.476
ENSORLP00000031025
Proline-rich transmembrane protein 2.
    
 0.452
LOC101174968
Enhancer of rudimentary homolog; May have a role in the cell cycle.
    
 
 0.444
LOC101161113
Enhancer of rudimentary homolog; May have a role in the cell cycle.
    
 
 0.444
ap2m1
AP-2 complex subunit mu; Component of the adaptor protein complex 2 (AP-2). Adaptor protein complexes function in protein transport via transport vesicles in different membrane traffic pathways. Adaptor protein complexes are vesicle coat components and appear to be involved in cargo selection and vesicle formation. AP-2 is involved in clathrin-dependent endocytosis in which cargo proteins are incorporated into vesicles surrounded by clathrin (clathrin-coated vesicles, CCVs) which are destined for fusion with the early endosome. The clathrin lattice serves as a mechanical scaffold but i [...]
    
  0.437
gak
Cyclin G associated kinase.
    
 0.421
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
Server load: low (24%) [HD]