Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LOC101157325 | LOC101170713 | ENSORLP00000020520 | ENSORLP00000013571 | Alanine--glyoxylate and serine--pyruvate aminotransferase b. | Threonine aldolase 1. | 0.992 |
LOC101157325 | LOC101174079 | ENSORLP00000020520 | ENSORLP00000024097 | Alanine--glyoxylate and serine--pyruvate aminotransferase b. | Alanine--glyoxylate and serine--pyruvate aminotransferase a. | 0.927 |
LOC101157325 | SHMT2 | ENSORLP00000020520 | ENSORLP00000004789 | Alanine--glyoxylate and serine--pyruvate aminotransferase b. | Serine hydroxymethyltransferase 2. | 0.967 |
LOC101157325 | agxt2 | ENSORLP00000020520 | ENSORLP00000044031 | Alanine--glyoxylate and serine--pyruvate aminotransferase b. | Alanine--glyoxylate aminotransferase 2; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.970 |
LOC101157325 | dao | ENSORLP00000020520 | ENSORLP00000008866 | Alanine--glyoxylate and serine--pyruvate aminotransferase b. | D-amino-acid oxidase, tandem duplicate 2. | 0.955 |
LOC101157325 | gldc | ENSORLP00000020520 | ENSORLP00000029139 | Alanine--glyoxylate and serine--pyruvate aminotransferase b. | Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine. | 0.957 |
LOC101157325 | pipox | ENSORLP00000020520 | ENSORLP00000017216 | Alanine--glyoxylate and serine--pyruvate aminotransferase b. | Pipecolic acid oxidase. | 0.956 |
LOC101157325 | sardh | ENSORLP00000020520 | ENSORLP00000012815 | Alanine--glyoxylate and serine--pyruvate aminotransferase b. | Sarcosine dehydrogenase. | 0.951 |
LOC101157325 | shmt1 | ENSORLP00000020520 | ENSORLP00000017275 | Alanine--glyoxylate and serine--pyruvate aminotransferase b. | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | 0.983 |
LOC101157325 | shmt2 | ENSORLP00000020520 | ENSORLP00000006970 | Alanine--glyoxylate and serine--pyruvate aminotransferase b. | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | 0.967 |
LOC101170713 | LOC101157325 | ENSORLP00000013571 | ENSORLP00000020520 | Threonine aldolase 1. | Alanine--glyoxylate and serine--pyruvate aminotransferase b. | 0.992 |
LOC101170713 | LOC101174079 | ENSORLP00000013571 | ENSORLP00000024097 | Threonine aldolase 1. | Alanine--glyoxylate and serine--pyruvate aminotransferase a. | 0.992 |
LOC101170713 | SHMT2 | ENSORLP00000013571 | ENSORLP00000004789 | Threonine aldolase 1. | Serine hydroxymethyltransferase 2. | 0.946 |
LOC101170713 | agxt2 | ENSORLP00000013571 | ENSORLP00000044031 | Threonine aldolase 1. | Alanine--glyoxylate aminotransferase 2; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.936 |
LOC101170713 | dao | ENSORLP00000013571 | ENSORLP00000008866 | Threonine aldolase 1. | D-amino-acid oxidase, tandem duplicate 2. | 0.937 |
LOC101170713 | gldc | ENSORLP00000013571 | ENSORLP00000029139 | Threonine aldolase 1. | Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine. | 0.994 |
LOC101170713 | pipox | ENSORLP00000013571 | ENSORLP00000017216 | Threonine aldolase 1. | Pipecolic acid oxidase. | 0.948 |
LOC101170713 | sardh | ENSORLP00000013571 | ENSORLP00000012815 | Threonine aldolase 1. | Sarcosine dehydrogenase. | 0.970 |
LOC101170713 | shmt1 | ENSORLP00000013571 | ENSORLP00000017275 | Threonine aldolase 1. | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | 0.946 |
LOC101170713 | shmt2 | ENSORLP00000013571 | ENSORLP00000006970 | Threonine aldolase 1. | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | 0.946 |
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