STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H2LS12_ORYLAHexosyltransferase. (400 aa)    
Predicted Functional Partners:
chpf
Hexosyltransferase.
      
 0.704
LOC101169757
Fibrinogen C-terminal domain-containing protein.
      
 0.522
LOC101166093
Inositol-1-monophosphatase.
   
  
 0.520
LOC101166344
Inositol-1-monophosphatase.
   
  
 0.520
H2LYC2_ORYLA
Fibrinogen-like 1.
      
 0.518
LOC101163203
Inositol-1-monophosphatase.
   
  
 0.514
rfng
Beta-1,3-N-acetylglucosaminyltransferase.
    
 
 0.513
LOC101162464
Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.
      
 0.508
LOC101172515
Si:ch211-287a12.9.
      
 0.507
LOC101160932
Uncoupling protein 3; Belongs to the mitochondrial carrier (TC 2.A.29) family.
      
 0.505
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.