Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC101158134Solute carrier family 40 protein; May be involved in iron transport and iron homeostasis. Belongs to the ferroportin (FP) (TC 2.A.100) family. SLC40A subfamily. (385 aa)    
Predicted Functional Partners:
LOC101157971
Uncharacterized protein.
     
 0.926
slc40a1
Solute carrier family 40 protein; May be involved in iron transport and iron homeostasis. Belongs to the ferroportin (FP) (TC 2.A.100) family. SLC40A subfamily.
  
  
 
0.903
LOC101172220
Uncharacterized protein.
     
  0.900
H2N2G5_ORYLA
Uncharacterized protein.
     
  0.900
LOC101171566
Ceruloplasmin; Belongs to the multicopper oxidase family.
    
 0.687
ENSORLP00000034462
Uncharacterized protein; Belongs to the multicopper oxidase family.
    
 0.687
LOC101155535
Hephaestin-like 1b; Belongs to the multicopper oxidase family.
    
 0.687
LOC101159870
Cytochrome b reductase 1.
      
 0.646
LOC101172288
Amyloid beta (A4) precursor protein b.
    
 
 0.523
APP
Amyloid beta precursor protein.
    
 
 0.523
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.