STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101157238Interleukin 13 receptor, alpha 2. (401 aa)    
Predicted Functional Partners:
LOC101175200
IL6Ra-bind domain-containing protein.
     
 0.936
slc8b1
Solute carrier family 8 member B1; Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family.
    
   0.621
cdan1
Codanin 1.
      
 0.585
fam120c
Family with sequence similarity 120C.
      
 0.583
LOC101158601
Chitinase, acidic.1; Belongs to the glycosyl hydrolase 18 family.
    
 
 0.547
LOC101158848
Chitinase, acidic.1; Belongs to the glycosyl hydrolase 18 family.
    
 
 0.547
LOC101159095
Chitinase, acidic.3; Belongs to the glycosyl hydrolase 18 family.
    
 
 0.547
LOC101163739
Chitin-binding type-2 domain-containing protein; Belongs to the glycosyl hydrolase 18 family.
    
 
 0.547
LOC101163739-2
Chitin-binding type-2 domain-containing protein; Belongs to the glycosyl hydrolase 18 family.
    
 
 0.547
wdfy3
WD repeat and FYVE domain containing 3.
      
 0.527
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.