ssr4 protein (Oryzias latipes) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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Edges represent protein-protein associations

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co-expression

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[Homology]

Score

ssr4

Signal sequence receptor, delta. (167 aa)

Predicted Functional Partners:

ssr3

0.999

ssr2

0.999

ssr1

0.998

sec61b

0.995

LOC101155508

0.986

rpl8

0.963

LOC101160979

0.947

sec61g

0.943

rpl32

0.940

rpl27

0.936

Your Current Organism:

Oryzias latipes

NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC101155508	LOC101160979	ENSORLP00000019559	ENSORLP00000034012	Uncharacterized protein.	Ribosomal protein L10.	0.496
LOC101155508	rpl27	ENSORLP00000019559	ENSORLP00000001908	Uncharacterized protein.	60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family.	0.612
LOC101155508	rpl32	ENSORLP00000019559	ENSORLP00000036808	Uncharacterized protein.	Ribosomal protein L32.	0.605
LOC101155508	rpl8	ENSORLP00000019559	ENSORLP00000013387	Uncharacterized protein.	60S ribosomal protein L8.	0.668
LOC101155508	sec61b	ENSORLP00000019559	ENSORLP00000037855	Uncharacterized protein.	Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum.	0.835
LOC101155508	sec61g	ENSORLP00000019559	ENSORLP00000043486	Uncharacterized protein.	SEC61 translocon gamma subunit.	0.610
LOC101155508	ssr1	ENSORLP00000019559	ENSORLP00000039475	Uncharacterized protein.	Signal sequence receptor, alpha.	0.903
LOC101155508	ssr2	ENSORLP00000019559	ENSORLP00000033382	Uncharacterized protein.	Translocon-associated protein subunit beta; TRAP proteins are part of a complex whose function is to bind calcium to the ER membrane and thereby regulate the retention of ER resident proteins.	0.993
LOC101155508	ssr3	ENSORLP00000019559	ENSORLP00000015679	Uncharacterized protein.	Signal sequence receptor, gamma.	0.996
LOC101155508	ssr4	ENSORLP00000019559	ENSORLP00000008877	Uncharacterized protein.	Signal sequence receptor, delta.	0.986
LOC101160979	LOC101155508	ENSORLP00000034012	ENSORLP00000019559	Ribosomal protein L10.	Uncharacterized protein.	0.496
LOC101160979	rpl27	ENSORLP00000034012	ENSORLP00000001908	Ribosomal protein L10.	60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family.	0.999
LOC101160979	rpl32	ENSORLP00000034012	ENSORLP00000036808	Ribosomal protein L10.	Ribosomal protein L32.	0.999
LOC101160979	rpl8	ENSORLP00000034012	ENSORLP00000013387	Ribosomal protein L10.	60S ribosomal protein L8.	0.998
LOC101160979	sec61b	ENSORLP00000034012	ENSORLP00000037855	Ribosomal protein L10.	Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum.	0.968
LOC101160979	sec61g	ENSORLP00000034012	ENSORLP00000043486	Ribosomal protein L10.	SEC61 translocon gamma subunit.	0.930
LOC101160979	ssr1	ENSORLP00000034012	ENSORLP00000039475	Ribosomal protein L10.	Signal sequence receptor, alpha.	0.631
LOC101160979	ssr2	ENSORLP00000034012	ENSORLP00000033382	Ribosomal protein L10.	Translocon-associated protein subunit beta; TRAP proteins are part of a complex whose function is to bind calcium to the ER membrane and thereby regulate the retention of ER resident proteins.	0.769
LOC101160979	ssr3	ENSORLP00000034012	ENSORLP00000015679	Ribosomal protein L10.	Signal sequence receptor, gamma.	0.908
LOC101160979	ssr4	ENSORLP00000034012	ENSORLP00000008877	Ribosomal protein L10.	Signal sequence receptor, delta.	0.947