STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mrpl12Mitochondrial ribosomal protein L12. (195 aa)    
Predicted Functional Partners:
MRPL21
Mitochondrial ribosomal protein L21.
   
 
 0.999
rps3
Ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
  
 
 0.999
mrps9
Mitochondrial ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.
  
 
 0.999
rpl23a
Ribosomal protein L23a; Belongs to the universal ribosomal protein uL23 family.
  
 
 0.999
mrpl32
Mitochondrial ribosomal protein L32.
  
 
 0.999
Mrps6
Mitochondrial ribosomal protein S6.
  
 
 0.999
mrpl19
Mitochondrial ribosomal protein L19.
  
 
 0.999
mrpl36
Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.
  
 
 0.999
mrpl27
Mitochondrial ribosomal protein L27.
  
 
 0.999
mrps10
Mitochondrial ribosomal protein S10.
  
 
 0.999
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.