STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H2LS44_ORYLAEABR domain-containing protein. (218 aa)    
Predicted Functional Partners:
ttk
Ttk protein kinase.
   
  
 0.804
aspm
Abnormal spindle microtubule assembly.
   
  
 0.762
ndc80
NDC80 kinetochore complex component.
   
  
 0.753
nusap1
Nucleolar and spindle associated protein 1.
   
  
 0.752
nuf2
UF2 component of NDC80 kinetochore complex.
   
  
 0.735
ube2c
Ubiquitin-conjugating enzyme E2C; Belongs to the ubiquitin-conjugating enzyme family.
   
  
 0.694
kif11
Kinesin family member 11; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
  
 0.681
pclaf
PCNA clamp associated factor.
   
  
 0.675
ncapg
Non-SMC condensin I complex, subunit G.
   
  
 0.635
ENSORLP00000038626
Ldh_1_N domain-containing protein.
    
 
 0.630
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.