Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC101161839MYND-type domain-containing protein. (439 aa)    
Predicted Functional Partners:
LOC101168821
Translational activator of mitochondrially encoded cytochrome c oxidase I.
      
 0.608
COX14
Cytochrome c oxidase assembly factor COX14.
      
 0.573
qrsl1
Glutamyl-tRNA(Gln) amidotransferase subunit A, mitochondrial; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in the mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln). Belongs to the amidase family. GatA subfamily.
      
 0.527
pglyrp2
Peptidoglycan recognition protein 6.
      
 0.523
LOC101161131
Lysine (K)-specific demethylase 6A, like.
   
 0.512
LOC101164833
Lysine (K)-specific demethylase 6B, b.
   
 0.512
H2ME95_ORYLA
Lysine (K)-specific demethylase 6A.
   
 0.512
ENSORLP00000039316
Uncharacterized protein.
   
 0.512
LOC101160692
Lysine (K)-specific demethylase 6B, a.
   
 0.512
trmu
tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase.
    
 
 0.507
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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