STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101157966Leucine-rich, glioma inactivated 1a. (543 aa)    
Predicted Functional Partners:
LOC101159060
Leucine rich repeat containing 17.
     
 0.515
cadm3
Cell adhesion molecule 3.
      
 0.511
adam23
ADAM metallopeptidase domain 23.
     
 0.508
LOC101170837
Uncharacterized protein.
      
 0.506
LOC101160640
Neuroplastin b.
      
 0.506
LOC101170789
Uncharacterized protein.
      
 0.501
ADAM11
ADAM metallopeptidase domain 11.
     
 0.480
adam22
ADAM metallopeptidase domain 22.
     
 0.480
LOC101159950
Uncharacterized protein.
     
 0.480
LOC101170109
Neurexophilin; May be signaling molecules that resemble neuropeptides.
  
    0.445
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.