Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LOC101159084Switching B cell complex subunit SWAP70a. (546 aa)    
Predicted Functional Partners:
Brcc3
BRCA1/BRCA2-containing complex, subunit 3.
    
   0.744
babam1
BRISC and BRCA1 A complex member 1.
    
   0.728
babam2
BRISC and BRCA1 A complex member 2.
    
  0.724
abraxas2
Abraxas 2, BRISC complex subunit.
    
   0.627
LOC101175393
Macrophage stimulating 1 receptor a.
   
  0.513
met
MET proto-oncogene, receptor tyrosine kinase.
   
  0.513
mst1r
Macrophage stimulating 1 receptor b.
   
  0.513
TMEM19
Transmembrane protein 19.
      
 0.489
Brk1
BRICK1 subunit of SCAR/WAVE actin nucleating complex.
     
 0.470
dcxr
Dicarbonyl/L-xylulose reductase.
    
   0.463
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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