Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC101166755Prostaglandin D2 synthase b, tandem duplicate 1; Belongs to the calycin superfamily. Lipocalin family. (183 aa)    
Predicted Functional Partners:
ptges
Prostaglandin E synthase.
   
 
 0.918
LOC101165663
Lipocln_cytosolic_FA-bd_dom domain-containing protein; Belongs to the calycin superfamily. Lipocalin family.
  
  
 
0.912
ptgs2
EGF-like domain-containing protein.
     
 0.908
LOC101173634
Prostaglandin-endoperoxide synthase 1.
     
 0.904
LOC101161174
Prostaglandin-endoperoxide synthase 1.
     
 0.904
PTGIS
Prostaglandin I2 synthase; Belongs to the cytochrome P450 family.
     
  0.900
prxl2b
Peroxiredoxin like 2B.
     
  0.900
tbxas1
Thromboxane A synthase 1 (platelet); Belongs to the cytochrome P450 family.
     
  0.900
ptges2
Prostaglandin E synthase 2-like.
     
  0.900
ptges3
Prostaglandin E synthase 3b (cytosolic).
     
  0.900
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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