STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
msrb2Peptide-methionine (R)-S-oxide reductase; Methionine-sulfoxide reductase that specifically reduces methionine (R)-sulfoxide back to methionine. While in many cases methionine oxidation is the result of random oxidation following oxidative stress, methionine oxidation is also a post-translational modification that takes place on specific residues. (189 aa)    
Predicted Functional Partners:
txn
Thioredoxin; Belongs to the thioredoxin family.
  
 0.791
LOC101163534
Si:ch1073-358c10.1.
 
 
 0.738
LOC101174315
Methionine sulfoxide reductase A.
 
 
 0.733
rbp4
Retinol binding protein 4, plasma; Belongs to the calycin superfamily. Lipocalin family.
    
 
 0.608
lemd3
LEM domain containing 3.
      
 0.603
timm10
Translocase of inner mitochondrial membrane 10 homolog (yeast).
    
   0.602
LOC101170553
NME/NM23 family member 8; Belongs to the NDK family.
  
 0.578
grpel1
GrpE protein homolog; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the GrpE family.
   
 
 0.573
fbxl15
F-box and leucine-rich repeat protein 15.
   
  
 0.565
ephx2
AB hydrolase-1 domain-containing protein.
     
 0.554
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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