STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
traf2TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family. (523 aa)    
Predicted Functional Partners:
tradd
Tnfrsf1a-associated via death domain.
    
 0.994
tnfrsf1a
Tumor necrosis factor receptor superfamily, member 1a.
    
 0.986
fadd
Uncharacterized protein.
   
 0.973
LOC101174595
Mitogen-activated protein kinase kinase kinase 14a.
    
 0.970
LOC101166422
ADP-ribosylation factor 2b.
    
 0.970
ripk1
Receptor (TNFRSF)-interacting serine-threonine kinase 1, like.
   
 0.964
tab1
TGF-beta activated kinase 1/MAP3K7 binding protein 1.
   
 0.955
map3k7
Mitogen-activated protein kinase kinase kinase 7.
   
 0.954
LOC101161312
Zgc:153759.
    
 0.953
LOC101172600
Baculoviral IAP repeat containing 2.
   
 0.950
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.