STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101167360Immunoglobulin superfamily member 22. (1490 aa)    
Predicted Functional Partners:
amn
Amnion associated transmembrane protein.
      
 0.587
pes1
Pescadillo homolog; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 0.563
wdr18
WD repeat domain 18.
   
 0.549
Gpr63
G protein-coupled receptor 63.
      
 0.539
tex10
Testis expressed 10.
   
 0.531
LOC101163011
Transcobalamin II.
    
 
 0.521
hal
Histidine ammonia-lyase; Belongs to the PAL/histidase family.
      
 0.520
ivns1abp
Influenza virus NS1A binding protein a.
    
 
 0.509
LOC101168453
Si:dkey-28n18.9.
      
 0.494
LOC101165530
Uncharacterized protein.
      
 0.494
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.